Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC012313.10-201ENST00000623509 926 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AL805961.1-202ENST00000641562 540 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AC107918.4-202ENST00000641623 219 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PI4KAP1-204ENST00000612579 1703 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 AC006504.4-201ENST00000592118 1568 ntBASIC14.26□□□□□ -0.13
HMG20AQ9NP66 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HMG20AQ9NP66 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 ELK2BP-201ENST00000415014 1224 ntBASIC14.25□□□□□ -0.13
HMG20AQ9NP66 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HMG20AQ9NP66 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 FAM8A3P-201ENST00000427218 844 ntBASIC14.24□□□□□ -0.13
HMG20AQ9NP66 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.24□□□□□ -0.13
HMG20AQ9NP66 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.24□□□□□ -0.13
HMG20AQ9NP66 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms