Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 HLA-K-203ENST00000430151 1046 ntBASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 AP003171.2-201ENST00000528208 925 ntBASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 ENPP7P5-201ENST00000541031 1031 ntBASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 KRT8P14-201ENST00000414254 1442 ntBASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
KIAA1549Q9HCM3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 MIR1202-201ENST00000408529 83 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC022494.1-201ENST00000466044 728 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC108725.1-201ENST00000495472 409 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC145423.3-201ENST00000615987 467 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC092933.1-201ENST00000393644 945 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 MIR1908-201ENST00000410394 80 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 MROH4P-201ENST00000431302 1578 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 KRT43P-201ENST00000434019 910 ntBASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
KIAA1549Q9HCM3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 AC006486.2-201ENST00000624246 2199 ntBASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
KIAA1549Q9HCM3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms