Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 TCAF2P1-201ENST00000291129 2421 ntBASIC13.68□□□□□ -0.22
CDH20Q9HBT6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDH20Q9HBT6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 TSPY16P-201ENST00000449843 468 ntBASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 AC009118.2-201ENST00000613275 655 ntBASIC13.67□□□□□ -0.22
CDH20Q9HBT6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.67□□□□□ -0.22
CDH20Q9HBT6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CDH20Q9HBT6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AC015922.1-201ENST00000421102 1152 ntBASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 LINC01115-203ENST00000606068 577 ntBASIC13.66□□□□□ -0.22
CDH20Q9HBT6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.66□□□□□ -0.22
CDH20Q9HBT6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms