Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AC061975.2-201ENST00000581722 295 ntBASIC14.97□□□□□ -0.01
PIF1Q9H611 SPTSSB-204ENST00000617024 1292 ntBASIC14.97□□□□□ -0.01
PIF1Q9H611 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
PIF1Q9H611 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
PIF1Q9H611 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AL136982.4-201ENST00000437689 1740 ntBASIC14.97□□□□□ -0.01
PIF1Q9H611 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 PTENP1-202ENST00000532280 3996 ntBASIC14.97□□□□□ -0.01
PIF1Q9H611 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
PIF1Q9H611 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 CICP4-201ENST00000447359 2812 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PIF1Q9H611 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 AL022342.1-201ENST00000400363 863 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 MED15P5-201ENST00000423150 992 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.96□□□□□ -0.01
PIF1Q9H611 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.96□□□□□ -0.01
PIF1Q9H611 SLC25A1P1-201ENST00000528351 927 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.96□□□□□ -0.01
PIF1Q9H611 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.96□□□□□ -0.01
PIF1Q9H611 AL161645.1-201ENST00000622716 1255 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PIF1Q9H611 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
PIF1Q9H611 AC005912.2-201ENST00000619492 2400 ntBASIC14.96□□□□□ -0.01
PIF1Q9H611 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PIF1Q9H611 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PIF1Q9H611 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
PIF1Q9H611 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PIF1Q9H611 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 LINC01230-201ENST00000625222 3017 ntBASIC14.95□□□□□ -0.02
PIF1Q9H611 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PIF1Q9H611 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.95□□□□□ -0.02
PIF1Q9H611 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PIF1Q9H611 KRT18P2-201ENST00000447938 1258 ntBASIC14.95□□□□□ -0.02
PIF1Q9H611 KRT18P3-201ENST00000451602 1288 ntBASIC14.95□□□□□ -0.02
PIF1Q9H611 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 AC098859.1-201ENST00000502915 1238 ntBASIC14.95□□□□□ -0.02
PIF1Q9H611 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.95□□□□□ -0.02
PIF1Q9H611 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 FOXO1B-201ENST00000504678 1527 ntBASIC14.95□□□□□ -0.02
PIF1Q9H611 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PIF1Q9H611 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PIF1Q9H611 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PIF1Q9H611 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms