Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PGAM5P1-201ENST00000518923 814 ntBASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 LINC00528-201ENST00000600723 2160 ntBASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR2J3Q9H1A7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 FGD5P1-202ENST00000614866 2498 ntBASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 AL390755.1-201ENST00000623716 2027 ntBASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 AC232323.1-201ENST00000540724 2099 ntBASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 REXO1L5P-201ENST00000622260 2098 ntBASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ELL2P1-201ENST00000413990 1906 ntBASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR2J3Q9H1A7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 ALG1L8P-201ENST00000533887 760 ntBASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 AC018529.1-201ENST00000613063 361 ntBASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 AC005089.1-201ENST00000619486 2241 ntBASIC14.43□□□□□ -0.1
POLR2J3Q9H1A7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms