Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 CICP4-201ENST00000447359 2812 ntBASIC16.11■□□□□ 0.17
HAPLN3Q96S86 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HAPLN3Q96S86 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 CRB3P1-201ENST00000449338 276 ntBASIC16.1■□□□□ 0.17
HAPLN3Q96S86 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 MIR8072-201ENST00000614241 80 ntBASIC16.1■□□□□ 0.17
HAPLN3Q96S86 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 AL645728.2-202ENST00000641679 227 ntBASIC16.1■□□□□ 0.17
HAPLN3Q96S86 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HAPLN3Q96S86 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 RPL13AP25-201ENST00000484130 612 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 AC123567.1-201ENST00000548294 1261 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 TP53TG3HP-202ENST00000569755 579 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 SPDYE22P-201ENST00000582158 798 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 BRI3BPP1-201ENST00000594224 787 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 TMEM261P1-201ENST00000604899 340 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 AL662799.1-202ENST00000614205 422 ntBASIC16.09■□□□□ 0.17
HAPLN3Q96S86 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HAPLN3Q96S86 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HAPLN3Q96S86 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.08■□□□□ 0.16
HAPLN3Q96S86 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HAPLN3Q96S86 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HAPLN3Q96S86 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HAPLN3Q96S86 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms