Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC018712.1-201ENST00000455767 687 ntBASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC098859.1-201ENST00000502915 1238 ntBASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 MIR4751-201ENST00000578027 74 ntBASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC104692.2-201ENST00000603054 253 ntBASIC12.69□□□□□ -0.38
RAB40CQ96S21 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC148477.8-201ENST00000624298 468 ntBASIC12.69□□□□□ -0.38
RAB40CQ96S21 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.69□□□□□ -0.38
RAB40CQ96S21 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RAB40CQ96S21 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 INTS4P1-203ENST00000641008 3683 ntBASIC12.68□□□□□ -0.38
RAB40CQ96S21 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 PHKG1P2-201ENST00000457537 863 ntBASIC12.68□□□□□ -0.38
RAB40CQ96S21 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.68□□□□□ -0.38
RAB40CQ96S21 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AL773604.1-201ENST00000617417 272 ntBASIC12.68□□□□□ -0.38
RAB40CQ96S21 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RAB40CQ96S21 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RAB40CQ96S21 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB40CQ96S21 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RAB40CQ96S21 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms