Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC108725.1-201ENST00000495472 409 ntBASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 RNA5SP412-201ENST00000516234 123 ntBASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 AC148477.4-201ENST00000613430 1793 ntBASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC85AQ96PX6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 KRT18P25-201ENST00000508931 1278 ntBASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 AL138709.1-201ENST00000614840 1693 ntBASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC85AQ96PX6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 YBX1P6-201ENST00000442962 1002 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 MIR6869-201ENST00000619434 62 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 AC138951.2-201ENST00000623455 1161 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 TUBB1P2-201ENST00000422712 1306 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 TUBB1P1-201ENST00000503144 1300 ntBASIC19.22■□□□□ 0.67
CCDC85AQ96PX6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC85AQ96PX6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 535.9 ms