Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 EIF4HP1-201ENST00000453115 687 ntBASIC20.23■□□□□ 0.83
NBPF4Q96M43 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 DUX4L47-201ENST00000566374 394 ntBASIC20.23■□□□□ 0.83
NBPF4Q96M43 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 CLUHP2-201ENST00000426660 1303 ntBASIC20.23■□□□□ 0.83
NBPF4Q96M43 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
NBPF4Q96M43 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NBPF4Q96M43 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 MIR3619-201ENST00000579667 83 ntBASIC20.22■□□□□ 0.83
NBPF4Q96M43 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 ZACNP1-201ENST00000612259 710 ntBASIC20.22■□□□□ 0.83
NBPF4Q96M43 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NBPF4Q96M43 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
NBPF4Q96M43 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 AC055811.4-201ENST00000624039 1754 ntBASIC20.21■□□□□ 0.83
NBPF4Q96M43 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.21■□□□□ 0.83
NBPF4Q96M43 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 SERPINA13P-202ENST00000478994 924 ntBASIC20.21■□□□□ 0.83
NBPF4Q96M43 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 PRORSD1P-202ENST00000563365 2154 ntBASIC20.21■□□□□ 0.83
NBPF4Q96M43 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NBPF4Q96M43 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.21■□□□□ 0.83
NBPF4Q96M43 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NBPF4Q96M43 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF4Q96M43 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NBPF4Q96M43 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF4Q96M43 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NBPF4Q96M43 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.2■□□□□ 0.82
NBPF4Q96M43 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF4Q96M43 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF4Q96M43 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NBPF4Q96M43 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms