Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 PPP1R26P4-201ENST00000619065 3527 ntBASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 UXT-AS1-201ENST00000590504 1525 ntBASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHAMP1Q96JM3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 ALG1L5P-201ENST00000482043 771 ntBASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.07■□□□□ 0.48
CHAMP1Q96JM3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AC074338.1-201ENST00000416825 156 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 FAM58DP-201ENST00000428076 619 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 SPDYE11-202ENST00000450699 704 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 SPDYE9P-201ENST00000570642 692 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AC027601.4-201ENST00000611259 610 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 SPDYE10P-202ENST00000612005 668 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 SPDYE8P-202ENST00000612377 668 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 AL928921.2-201ENST00000641325 2442 ntBASIC18.06■□□□□ 0.48
CHAMP1Q96JM3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.05■□□□□ 0.48
CHAMP1Q96JM3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms