Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM54Q969K7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM54Q969K7 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.67□□□□□ -0.22
TMEM54Q969K7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.67□□□□□ -0.22
TMEM54Q969K7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC091951.1-201ENST00000512854 2465 ntBASIC13.67□□□□□ -0.22
TMEM54Q969K7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM54Q969K7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.67□□□□□ -0.22
TMEM54Q969K7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 MIR661-201ENST00000384842 89 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 DFFBP1-201ENST00000433250 979 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AC026410.3-201ENST00000514280 936 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AL049840.4-201ENST00000602422 811 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 AL355385.1-201ENST00000606123 409 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 AL662799.1-202ENST00000614205 422 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 TCAF2P1-201ENST00000291129 2421 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 AGAP7P-201ENST00000582299 2062 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 AGAP14-201ENST00000624701 2060 ntBASIC13.66□□□□□ -0.22
TMEM54Q969K7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.66□□□□□ -0.22
TMEM54Q969K7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms