Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HPS3Q969F9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HPS3Q969F9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 CICP24-201ENST00000605464 2705 ntBASIC17.24■□□□□ 0.35
HPS3Q969F9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS3Q969F9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS3Q969F9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS3Q969F9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS3Q969F9 AC092337.1-201ENST00000568699 1129 ntBASIC17.24■□□□□ 0.35
HPS3Q969F9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 SRD5A3P1-201ENST00000603021 949 ntBASIC17.24■□□□□ 0.35
HPS3Q969F9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.24■□□□□ 0.35
HPS3Q969F9 AL158212.4-201ENST00000624062 1286 ntBASIC17.24■□□□□ 0.35
HPS3Q969F9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HPS3Q969F9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.24■□□□□ 0.35
HPS3Q969F9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.24■□□□□ 0.35
HPS3Q969F9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HPS3Q969F9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
HPS3Q969F9 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS3Q969F9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HPS3Q969F9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
HPS3Q969F9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS3Q969F9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.23■□□□□ 0.35
HPS3Q969F9 BASP1P1-201ENST00000430708 665 ntBASIC17.23■□□□□ 0.35
HPS3Q969F9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.23■□□□□ 0.35
HPS3Q969F9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 GNAQP1-201ENST00000444815 1067 ntBASIC17.23■□□□□ 0.35
HPS3Q969F9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 AL512638.1-201ENST00000457493 794 ntBASIC17.23■□□□□ 0.35
HPS3Q969F9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.23■□□□□ 0.35
HPS3Q969F9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 AC025181.2-201ENST00000606994 802 ntBASIC17.23■□□□□ 0.35
HPS3Q969F9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HPS3Q969F9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 CLK3P2-201ENST00000427566 1453 ntBASIC17.23■□□□□ 0.35
HPS3Q969F9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.23■□□□□ 0.35
HPS3Q969F9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HPS3Q969F9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HPS3Q969F9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 AC068418.2-201ENST00000577309 3703 ntBASIC17.22■□□□□ 0.35
HPS3Q969F9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HPS3Q969F9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HPS3Q969F9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.22■□□□□ 0.35
HPS3Q969F9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HPS3Q969F9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.22■□□□□ 0.35
HPS3Q969F9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.22■□□□□ 0.35
HPS3Q969F9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms