Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC4Q92889 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC4Q92889 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.73■□□□□ 0.43
ERCC4Q92889 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC4Q92889 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC4Q92889 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC4Q92889 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.73■□□□□ 0.43
ERCC4Q92889 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ERCC4Q92889 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ERCC4Q92889 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ERCC4Q92889 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC4Q92889 MIR574-201ENST00000385209 96 ntBASIC17.72■□□□□ 0.43
ERCC4Q92889 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ERCC4Q92889 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC4Q92889 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.72■□□□□ 0.43
ERCC4Q92889 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 RARRES2P9-201ENST00000565168 469 ntBASIC17.72■□□□□ 0.43
ERCC4Q92889 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.72■□□□□ 0.43
ERCC4Q92889 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ERCC4Q92889 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ERCC4Q92889 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 FAM58DP-201ENST00000428076 619 ntBASIC17.71■□□□□ 0.43
ERCC4Q92889 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AC040169.1-201ENST00000565382 521 ntBASIC17.71■□□□□ 0.43
ERCC4Q92889 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.71■□□□□ 0.43
ERCC4Q92889 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ERCC4Q92889 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
ERCC4Q92889 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ERCC4Q92889 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ERCC4Q92889 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.71■□□□□ 0.43
ERCC4Q92889 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
ERCC4Q92889 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.71■□□□□ 0.42
ERCC4Q92889 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.71■□□□□ 0.42
ERCC4Q92889 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
ERCC4Q92889 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.71■□□□□ 0.42
ERCC4Q92889 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
ERCC4Q92889 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC4Q92889 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ERCC4Q92889 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ERCC4Q92889 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ERCC4Q92889 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ERCC4Q92889 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms