Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC074386.1-202ENST00000463561 864 ntBASIC13.56□□□□□ -0.24
CCDC107Q8WV48 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 AC068137.2-201ENST00000605408 478 ntBASIC13.56□□□□□ -0.24
CCDC107Q8WV48 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 ZNF259P1-201ENST00000407656 1365 ntBASIC13.56□□□□□ -0.24
CCDC107Q8WV48 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 WASH6P-202ENST00000359512 1437 ntBASIC13.56□□□□□ -0.24
CCDC107Q8WV48 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
CCDC107Q8WV48 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 PRYP6-201ENST00000514804 343 ntBASIC13.55□□□□□ -0.24
CCDC107Q8WV48 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 AL161645.1-201ENST00000622716 1255 ntBASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 PMS2P7-201ENST00000506558 1336 ntBASIC13.55□□□□□ -0.24
CCDC107Q8WV48 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CCDC107Q8WV48 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 PTENP1-202ENST00000532280 3996 ntBASIC13.54□□□□□ -0.24
CCDC107Q8WV48 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CCDC107Q8WV48 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms