Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 ISCA2P1-201ENST00000425548 448 ntBASIC18.59■□□□□ 0.57
SNED1Q8TER0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 MIR4754-201ENST00000582477 89 ntBASIC18.59■□□□□ 0.57
SNED1Q8TER0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 YRDCP1-201ENST00000621419 643 ntBASIC18.59■□□□□ 0.57
SNED1Q8TER0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.59■□□□□ 0.57
SNED1Q8TER0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNED1Q8TER0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNED1Q8TER0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNED1Q8TER0 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 AC010141.1-201ENST00000411585 623 ntBASIC18.58■□□□□ 0.57
SNED1Q8TER0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNED1Q8TER0 NPM1P43-201ENST00000558669 786 ntBASIC18.58■□□□□ 0.57
SNED1Q8TER0 AC242376.1-201ENST00000559033 726 ntBASIC18.58■□□□□ 0.57
SNED1Q8TER0 AC020922.3-201ENST00000595064 547 ntBASIC18.58■□□□□ 0.57
SNED1Q8TER0 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 AC073352.2-201ENST00000609385 439 ntBASIC18.58■□□□□ 0.57
SNED1Q8TER0 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNED1Q8TER0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNED1Q8TER0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.58■□□□□ 0.57
SNED1Q8TER0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.58■□□□□ 0.56
SNED1Q8TER0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SNED1Q8TER0 AC112504.1-201ENST00000623415 1841 ntBASIC18.58■□□□□ 0.56
SNED1Q8TER0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNED1Q8TER0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.58■□□□□ 0.56
SNED1Q8TER0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 Z97180.1-201ENST00000445173 988 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 AC104073.2-201ENST00000453737 312 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 MIR3147-201ENST00000577811 66 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 AL355334.1-201ENST00000417713 215 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 RN7SL181P-201ENST00000462921 277 ntBASIC18.57■□□□□ 0.56
SNED1Q8TER0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNED1Q8TER0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.57■□□□□ 0.56
SNED1Q8TER0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms