Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRFBP1Q8NEF9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AC136621.1-201ENST00000624017 2304 ntBASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 AC084364.1-201ENST00000551967 1556 ntBASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 MYO15B-237ENST00000642007 4893 ntBASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SRFBP1Q8NEF9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 FAM8A3P-201ENST00000427218 844 ntBASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.88□□□□□ -0.03
SRFBP1Q8NEF9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms