Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 REXO1L2P-201ENST00000425429 2069 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AC148477.4-201ENST00000613430 1793 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AC004461.1-201ENST00000412461 403 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 PMS2P2-201ENST00000425039 1128 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AC023141.5-201ENST00000458585 616 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 FGD5P1-202ENST00000614866 2498 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AGAP7P-201ENST00000582299 2062 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 AGAP14-201ENST00000624701 2060 ntBASIC13.03□□□□□ -0.32
COMMD1Q8N668 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
COMMD1Q8N668 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
COMMD1Q8N668 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 AL512652.2-201ENST00000625156 1716 ntBASIC13.02□□□□□ -0.32
COMMD1Q8N668 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
COMMD1Q8N668 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.02□□□□□ -0.32
COMMD1Q8N668 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 AC005237.2-201ENST00000434368 219 ntBASIC13.02□□□□□ -0.33
COMMD1Q8N668 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 AL592309.1-201ENST00000443127 649 ntBASIC13.02□□□□□ -0.33
COMMD1Q8N668 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.02□□□□□ -0.33
COMMD1Q8N668 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COMMD1Q8N668 AC025678.2-201ENST00000562061 970 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms