Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 KRT8P44-201ENST00000441609 1350 ntBASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAM1L1Q8N609 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC022532.1-201ENST00000624563 1728 ntBASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC104457.1-201ENST00000401024 814 ntBASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 GHSR-202ENST00000427970 912 ntBASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 CR383656.12-201ENST00000549567 513 ntBASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 AC126365.1-201ENST00000578585 1514 ntBASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAM1L1Q8N609 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 INE1-201ENST00000456273 945 ntBASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 SAMD11P1-201ENST00000571429 661 ntBASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAM1L1Q8N609 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms