Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 HINT2P1-201ENST00000419438 481 ntBASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 POU5F1P6-201ENST00000466990 990 ntBASIC16.54■□□□□ 0.24
RNF135Q8IUD6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SOCS2P1-201ENST00000417727 557 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 NUS1P3-201ENST00000423502 862 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 STK33P1-201ENST00000423835 1218 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 AC134915.1-201ENST00000426461 574 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 AC105129.2-201ENST00000559536 390 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 AC009486.1-201ENST00000569860 813 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 MIR4722-201ENST00000578292 60 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 U62317.3-201ENST00000608319 855 ntBASIC16.53■□□□□ 0.24
RNF135Q8IUD6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF135Q8IUD6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AC134312.5-201ENST00000568031 1313 ntBASIC16.52■□□□□ 0.24
RNF135Q8IUD6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AL662890.1-201ENST00000396818 632 ntBASIC16.52■□□□□ 0.24
RNF135Q8IUD6 AC017007.3-201ENST00000479865 435 ntBASIC16.52■□□□□ 0.24
RNF135Q8IUD6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF135Q8IUD6 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms