Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DENND1BQ6P3S1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 AC008761.3-201ENST00000624803 892 ntBASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DENND1BQ6P3S1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 RN7SL399P-201ENST00000471648 279 ntBASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 FAM86LP-201ENST00000478302 853 ntBASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
DENND1BQ6P3S1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 AC007541.1-201ENST00000570282 1469 ntBASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 SLC7A15P-201ENST00000424028 1363 ntBASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 FAM207CP-201ENST00000443486 507 ntBASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 AC093004.1-201ENST00000508850 424 ntBASIC16.43■□□□□ 0.22
DENND1BQ6P3S1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms