Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 AC005840.4-201ENST00000541242 2494 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1AQ02539 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 SPDYE11-202ENST00000450699 704 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 IGHV3-62-201ENST00000520057 340 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 SPDYE9P-201ENST00000570642 692 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AC073389.1-201ENST00000595595 795 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 SPDYE10P-202ENST00000612005 668 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 SPDYE8P-202ENST00000612377 668 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 AC007686.3-201ENST00000619017 3487 ntBASIC12.01□□□□□ -0.49
HIST1H1AQ02539 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HIST1H1AQ02539 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
HIST1H1AQ02539 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
HIST1H1AQ02539 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1AQ02539 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12□□□□□ -0.49
HIST1H1AQ02539 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12□□□□□ -0.49
HIST1H1AQ02539 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
HIST1H1AQ02539 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
HIST1H1AQ02539 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms