Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SKP1P63208 RN7SL399P-201ENST00000471648 279 ntBASIC14.81□□□□□ -0.04
SKP1P63208 AC138761.1-201ENST00000584393 385 ntBASIC14.81□□□□□ -0.04
SKP1P63208 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.81□□□□□ -0.04
SKP1P63208 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SKP1P63208 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SKP1P63208 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.81□□□□□ -0.04
SKP1P63208 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SKP1P63208 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SKP1P63208 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.8□□□□□ -0.04
SKP1P63208 KRT18P64-201ENST00000434946 1219 ntBASIC14.8□□□□□ -0.04
SKP1P63208 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 GNAQP1-201ENST00000444815 1067 ntBASIC14.8□□□□□ -0.04
SKP1P63208 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 CRB3P1-201ENST00000449338 276 ntBASIC14.8□□□□□ -0.04
SKP1P63208 FAM86LP-201ENST00000478302 853 ntBASIC14.8□□□□□ -0.04
SKP1P63208 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.8□□□□□ -0.04
SKP1P63208 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.8□□□□□ -0.04
SKP1P63208 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SKP1P63208 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SKP1P63208 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SKP1P63208 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.79□□□□□ -0.04
SKP1P63208 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SKP1P63208 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms