Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
DEFA3P59666 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 PMS2P1-201ENST00000431037 1228 ntBASIC13.69□□□□□ -0.22
DEFA3P59666 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.69□□□□□ -0.22
DEFA3P59666 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA3P59666 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA3P59666 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.69□□□□□ -0.22
DEFA3P59666 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.69□□□□□ -0.22
DEFA3P59666 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 REXO1L1P-201ENST00000379010 6598 ntBASIC13.69□□□□□ -0.22
DEFA3P59666 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
DEFA3P59666 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DEFA3P59666 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
DEFA3P59666 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
DEFA3P59666 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 AC130686.1-201ENST00000622936 2466 ntBASIC13.68□□□□□ -0.22
DEFA3P59666 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 PMPCAP1-201ENST00000508114 1576 ntBASIC13.68□□□□□ -0.22
DEFA3P59666 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
DEFA3P59666 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
DEFA3P59666 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.68□□□□□ -0.22
DEFA3P59666 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.68□□□□□ -0.22
DEFA3P59666 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.68□□□□□ -0.22
DEFA3P59666 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.68□□□□□ -0.22
DEFA3P59666 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DEFA3P59666 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms