Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 PCDH8P1-201ENST00000428983 2773 ntBASIC11.59□□□□□ -0.55
CMC4P56277 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 AC020658.6-201ENST00000623564 1870 ntBASIC11.59□□□□□ -0.55
CMC4P56277 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CMC4P56277 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CMC4P56277 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CMC4P56277 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.55
CMC4P56277 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CMC4P56277 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
CMC4P56277 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.58□□□□□ -0.55
CMC4P56277 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CMC4P56277 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.58□□□□□ -0.56
CMC4P56277 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 AP006294.1-201ENST00000415407 339 ntBASIC11.58□□□□□ -0.56
CMC4P56277 SOCS2P1-201ENST00000417727 557 ntBASIC11.58□□□□□ -0.56
CMC4P56277 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 KRT18P64-201ENST00000434946 1219 ntBASIC11.58□□□□□ -0.56
CMC4P56277 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 AL162726.2-201ENST00000438986 1017 ntBASIC11.58□□□□□ -0.56
CMC4P56277 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.58□□□□□ -0.56
CMC4P56277 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 AC092552.1-201ENST00000547243 906 ntBASIC11.58□□□□□ -0.56
CMC4P56277 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.58□□□□□ -0.56
CMC4P56277 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.58□□□□□ -0.56
CMC4P56277 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.58□□□□□ -0.56
CMC4P56277 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.58□□□□□ -0.56
CMC4P56277 AL662799.1-202ENST00000614205 422 ntBASIC11.58□□□□□ -0.56
CMC4P56277 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.58□□□□□ -0.56
CMC4P56277 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.58□□□□□ -0.56
CMC4P56277 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
CMC4P56277 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CMC4P56277 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CMC4P56277 SPDYE18-201ENST00000510091 1050 ntBASIC11.57□□□□□ -0.56
CMC4P56277 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CMC4P56277 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 API5-211ENST00000534695 560 ntTSL 5 BASIC11.57□□□□□ -0.56
CMC4P56277 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms