Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.51□□□□□ -0.25
SNU13P55769 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 LINC01101-201ENST00000622953 1884 ntBASIC13.51□□□□□ -0.25
SNU13P55769 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 AP3S2-216ENST00000617003 1561 ntBASIC13.51□□□□□ -0.25
SNU13P55769 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.51□□□□□ -0.25
SNU13P55769 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 AC010327.4-202ENST00000591484 748 ntBASIC13.51□□□□□ -0.25
SNU13P55769 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.51□□□□□ -0.25
SNU13P55769 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SNU13P55769 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.51□□□□□ -0.25
SNU13P55769 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNU13P55769 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SNU13P55769 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.5□□□□□ -0.25
SNU13P55769 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNU13P55769 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNU13P55769 FAM220BP-201ENST00000377689 816 ntBASIC13.5□□□□□ -0.25
SNU13P55769 KRT18P32-201ENST00000424695 1287 ntBASIC13.5□□□□□ -0.25
SNU13P55769 ACTG1P14-201ENST00000446382 1122 ntBASIC13.5□□□□□ -0.25
SNU13P55769 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.5□□□□□ -0.25
SNU13P55769 AC005829.1-201ENST00000570002 483 ntBASIC13.5□□□□□ -0.25
SNU13P55769 MIR4469-201ENST00000583919 79 ntBASIC13.5□□□□□ -0.25
SNU13P55769 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 ELL2P1-201ENST00000413990 1906 ntBASIC13.5□□□□□ -0.25
SNU13P55769 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SNU13P55769 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
SNU13P55769 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.5□□□□□ -0.25
SNU13P55769 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNU13P55769 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms