Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CDH15P55291 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDH15P55291 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH15P55291 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH15P55291 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 AC099521.3-201ENST00000624251 2938 ntBASIC14.62□□□□□ -0.07
CDH15P55291 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 AC087163.2-201ENST00000457299 853 ntBASIC14.62□□□□□ -0.07
CDH15P55291 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.62□□□□□ -0.07
CDH15P55291 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH15P55291 AL589182.2-201ENST00000619332 1049 ntBASIC14.62□□□□□ -0.07
CDH15P55291 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 AC089987.1-201ENST00000551654 2209 ntBASIC14.62□□□□□ -0.07
CDH15P55291 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH15P55291 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH15P55291 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH15P55291 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH15P55291 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH15P55291 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH15P55291 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH15P55291 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH15P55291 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH15P55291 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms