Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 KRT18P28-201ENST00000453838 1332 ntBASIC15.38■□□□□ 0.05
CDKN2DP55273 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDKN2DP55273 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.38■□□□□ 0.05
CDKN2DP55273 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.38■□□□□ 0.05
CDKN2DP55273 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDKN2DP55273 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.38■□□□□ 0.05
CDKN2DP55273 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.37■□□□□ 0.05
CDKN2DP55273 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.37■□□□□ 0.05
CDKN2DP55273 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CDKN2DP55273 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 MIR943-201ENST00000401286 94 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.37■□□□□ 0.05
CDKN2DP55273 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 AC067863.1-201ENST00000494933 530 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 DUX4L27-201ENST00000554796 1261 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 AC025181.2-201ENST00000606994 802 ntBASIC15.37■□□□□ 0.05
CDKN2DP55273 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.37■□□□□ 0.05
CDKN2DP55273 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CDKN2DP55273 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.37■□□□□ 0.05
CDKN2DP55273 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDKN2DP55273 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDKN2DP55273 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CDKN2DP55273 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.37■□□□□ 0.05
CDKN2DP55273 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
CDKN2DP55273 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CDKN2DP55273 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKN2DP55273 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.36■□□□□ 0.05
CDKN2DP55273 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKN2DP55273 TSSK5P-201ENST00000423978 907 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 GHSR-202ENST00000427970 912 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 METTL21AP1-201ENST00000438852 635 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.36■□□□□ 0.05
CDKN2DP55273 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKN2DP55273 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKN2DP55273 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.36■□□□□ 0.05
CDKN2DP55273 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 AP000845.1-201ENST00000581677 2131 ntBASIC15.36■□□□□ 0.05
CDKN2DP55273 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.36■□□□□ 0.05
CDKN2DP55273 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CDKN2DP55273 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDKN2DP55273 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms