Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.79□□□□□ -0.04
CASP9P55211 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 YBX1P5-201ENST00000509441 847 ntBASIC14.79□□□□□ -0.04
CASP9P55211 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 AC026150.2-201ENST00000564693 1156 ntBASIC14.79□□□□□ -0.04
CASP9P55211 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.79□□□□□ -0.04
CASP9P55211 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.79□□□□□ -0.04
CASP9P55211 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CASP9P55211 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.79□□□□□ -0.04
CASP9P55211 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CASP9P55211 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 C8orf49-201ENST00000525043 1968 ntBASIC14.78□□□□□ -0.04
CASP9P55211 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 RPSAP43-201ENST00000402237 625 ntBASIC14.78□□□□□ -0.04
CASP9P55211 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 PMS2P2-201ENST00000425039 1128 ntBASIC14.78□□□□□ -0.04
CASP9P55211 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 SPDYE14P-201ENST00000442619 822 ntBASIC14.78□□□□□ -0.04
CASP9P55211 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 EEF1DP4-201ENST00000446006 880 ntBASIC14.78□□□□□ -0.04
CASP9P55211 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 MIR4453-201ENST00000584019 89 ntBASIC14.78□□□□□ -0.04
CASP9P55211 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CASP9P55211 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.78□□□□□ -0.04
CASP9P55211 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CASP9P55211 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CASP9P55211 SNX18-202ENST00000343017 3140 ntBASIC14.77□□□□□ -0.04
CASP9P55211 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.77□□□□□ -0.04
CASP9P55211 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 CICP11-201ENST00000434745 2827 ntBASIC14.77□□□□□ -0.04
CASP9P55211 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 KRT8P44-201ENST00000441609 1350 ntBASIC14.77□□□□□ -0.04
CASP9P55211 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CASP9P55211 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.77□□□□□ -0.04
CASP9P55211 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CASP9P55211 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.77□□□□□ -0.04
CASP9P55211 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CASP9P55211 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP9P55211 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CASP9P55211 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.77□□□□□ -0.05
CASP9P55211 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.77□□□□□ -0.05
CASP9P55211 AC004967.1-201ENST00000453589 447 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms