Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC093813.1-201ENST00000605066 256 ntBASIC17.14■□□□□ 0.33
GPC3P51654 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.14■□□□□ 0.33
GPC3P51654 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GPC3P51654 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GPC3P51654 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 BAATP1-201ENST00000412284 1225 ntBASIC17.13■□□□□ 0.33
GPC3P51654 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 RPS2P32-201ENST00000439199 892 ntBASIC17.13■□□□□ 0.33
GPC3P51654 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 AC093433.1-201ENST00000458048 571 ntBASIC17.13■□□□□ 0.33
GPC3P51654 AP005482.1-201ENST00000563722 1273 ntBASIC17.13■□□□□ 0.33
GPC3P51654 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.13■□□□□ 0.33
GPC3P51654 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.13■□□□□ 0.33
GPC3P51654 COX11-210ENST00000639671 696 ntBASIC17.13■□□□□ 0.33
GPC3P51654 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.13■□□□□ 0.33
GPC3P51654 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GPC3P51654 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.13■□□□□ 0.33
GPC3P51654 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 AC092850.2-201ENST00000623821 2697 ntBASIC17.13■□□□□ 0.33
GPC3P51654 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GPC3P51654 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.13■□□□□ 0.33
GPC3P51654 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 PDIA3P1-201ENST00000471856 1510 ntBASIC17.12■□□□□ 0.33
GPC3P51654 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.12■□□□□ 0.33
GPC3P51654 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.12■□□□□ 0.33
GPC3P51654 AC012441.1-201ENST00000446669 685 ntBASIC17.12■□□□□ 0.33
GPC3P51654 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.12■□□□□ 0.33
GPC3P51654 AC104989.1-201ENST00000519711 778 ntBASIC17.12■□□□□ 0.33
GPC3P51654 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC3P51654 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC3P51654 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.12■□□□□ 0.33
GPC3P51654 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 AC105250.1-201ENST00000509378 2057 ntBASIC17.12■□□□□ 0.33
GPC3P51654 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC3P51654 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms