Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.57■□□□□ 0.4
PRPHP41219 RARRES2P5-201ENST00000564013 466 ntBASIC17.57■□□□□ 0.4
PRPHP41219 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.57■□□□□ 0.4
PRPHP41219 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRPHP41219 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRPHP41219 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.57■□□□□ 0.4
PRPHP41219 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRPHP41219 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
PRPHP41219 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRPHP41219 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRPHP41219 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.57■□□□□ 0.4
PRPHP41219 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.57■□□□□ 0.4
PRPHP41219 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRPHP41219 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.57■□□□□ 0.4
PRPHP41219 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.57■□□□□ 0.4
PRPHP41219 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.56■□□□□ 0.4
PRPHP41219 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.56■□□□□ 0.4
PRPHP41219 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 INGX-202ENST00000489074 768 ntBASIC17.56■□□□□ 0.4
PRPHP41219 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 DOC2GP-202ENST00000514950 1163 ntBASIC17.56■□□□□ 0.4
PRPHP41219 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PRPHP41219 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PRPHP41219 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRPHP41219 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.55■□□□□ 0.4
PRPHP41219 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 LINC00554-201ENST00000564841 3011 ntBASIC17.55■□□□□ 0.4
PRPHP41219 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.55■□□□□ 0.4
PRPHP41219 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.55■□□□□ 0.4
PRPHP41219 AJ011932.1-201ENST00000621707 465 ntBASIC17.55■□□□□ 0.4
PRPHP41219 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PRPHP41219 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 CLK3P2-201ENST00000427566 1453 ntBASIC17.55■□□□□ 0.4
PRPHP41219 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
PRPHP41219 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PRPHP41219 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PRPHP41219 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRPHP41219 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms