Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 AC025678.2-201ENST00000562061 970 ntBASIC16.47■□□□□ 0.23
PCK1P35558 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 AP001160.2-201ENST00000596071 487 ntBASIC16.47■□□□□ 0.23
PCK1P35558 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCK1P35558 Z92544.3-201ENST00000624747 417 ntBASIC16.47■□□□□ 0.23
PCK1P35558 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.47■□□□□ 0.23
PCK1P35558 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCK1P35558 FO538757.1-201ENST00000623083 1397 ntBASIC16.47■□□□□ 0.23
PCK1P35558 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.47■□□□□ 0.23
PCK1P35558 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCK1P35558 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCK1P35558 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.47■□□□□ 0.23
PCK1P35558 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PCK1P35558 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 TUBB3P1-201ENST00000405796 1332 ntBASIC16.46■□□□□ 0.23
PCK1P35558 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 AC112693.3-201ENST00000624819 1983 ntBASIC16.46■□□□□ 0.23
PCK1P35558 AC104581.4-201ENST00000623126 3052 ntBASIC16.46■□□□□ 0.23
PCK1P35558 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 RPL37AP1-201ENST00000412502 279 ntBASIC16.46■□□□□ 0.23
PCK1P35558 TARDBPP1-201ENST00000442013 1203 ntBASIC16.46■□□□□ 0.23
PCK1P35558 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.46■□□□□ 0.23
PCK1P35558 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.46■□□□□ 0.23
PCK1P35558 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.46■□□□□ 0.23
PCK1P35558 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 AL033527.5-202ENST00000641632 1098 ntBASIC16.46■□□□□ 0.23
PCK1P35558 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 SNX18-202ENST00000343017 3140 ntBASIC16.46■□□□□ 0.23
PCK1P35558 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PCK1P35558 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.46■□□□□ 0.23
PCK1P35558 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCK1P35558 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCK1P35558 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCK1P35558 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PCK1P35558 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 Z97205.2-201ENST00000564697 1639 ntBASIC16.45■□□□□ 0.22
PCK1P35558 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
PCK1P35558 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 AL109954.1-202ENST00000564051 2148 ntBASIC16.45■□□□□ 0.22
PCK1P35558 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCK1P35558 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.45■□□□□ 0.22
PCK1P35558 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.45■□□□□ 0.22
PCK1P35558 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.45■□□□□ 0.22
PCK1P35558 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.45■□□□□ 0.22
PCK1P35558 AC051619.7-201ENST00000568314 623 ntBASIC16.45■□□□□ 0.22
PCK1P35558 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms