Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCD3P28288 AC027307.3-201ENST00000594262 1100 ntBASIC14.35□□□□□ -0.11
ABCD3P28288 LINC02084-201ENST00000606069 1096 ntBASIC14.35□□□□□ -0.11
ABCD3P28288 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCD3P28288 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCD3P28288 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.35□□□□□ -0.11
ABCD3P28288 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ABCD3P28288 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
ABCD3P28288 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ABCD3P28288 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCD3P28288 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 TCAF2P1-201ENST00000291129 2421 ntBASIC14.34□□□□□ -0.11
ABCD3P28288 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
ABCD3P28288 AL035633.1-201ENST00000406139 838 ntBASIC14.34□□□□□ -0.11
ABCD3P28288 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.34□□□□□ -0.11
ABCD3P28288 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.34□□□□□ -0.11
ABCD3P28288 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 RPL13AP25-201ENST00000484130 612 ntBASIC14.34□□□□□ -0.11
ABCD3P28288 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.34□□□□□ -0.11
ABCD3P28288 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 AL049840.4-201ENST00000602422 811 ntBASIC14.34□□□□□ -0.11
ABCD3P28288 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
ABCD3P28288 TMBIM7P-203ENST00000641617 1718 ntBASIC14.34□□□□□ -0.11
ABCD3P28288 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ABCD3P28288 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
ABCD3P28288 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.34□□□□□ -0.11
ABCD3P28288 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.33□□□□□ -0.11
ABCD3P28288 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ABCD3P28288 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.33□□□□□ -0.12
ABCD3P28288 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.33□□□□□ -0.12
ABCD3P28288 RPL5P21-201ENST00000404620 815 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ABCD3P28288 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.33□□□□□ -0.12
ABCD3P28288 ELK1P1-201ENST00000485699 580 ntBASIC14.33□□□□□ -0.12
ABCD3P28288 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms