Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.4□□□□□ -0.26
CD40P25942 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 AL138799.1-201ENST00000448213 1675 ntBASIC13.4□□□□□ -0.26
CD40P25942 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.4□□□□□ -0.26
CD40P25942 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CD40P25942 AC092127.1-201ENST00000567093 3455 ntBASIC13.4□□□□□ -0.26
CD40P25942 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.4□□□□□ -0.27
CD40P25942 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CD40P25942 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 AP005117.1-202ENST00000581724 1908 ntBASIC13.39□□□□□ -0.27
CD40P25942 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 PCDHA1-201ENST00000378133 2726 ntBASIC13.39□□□□□ -0.27
CD40P25942 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 AC012441.1-201ENST00000446669 685 ntBASIC13.39□□□□□ -0.27
CD40P25942 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.39□□□□□ -0.27
CD40P25942 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CD40P25942 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.39□□□□□ -0.27
CD40P25942 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.39□□□□□ -0.27
CD40P25942 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CD40P25942 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40P25942 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40P25942 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40P25942 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
CD40P25942 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 AC084364.1-201ENST00000551967 1556 ntBASIC13.38□□□□□ -0.27
CD40P25942 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40P25942 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40P25942 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40P25942 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms