Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SCAP-211ENST00000485967 508 ntTSL 213.57□□□□□ -0.249e-10■□□□□ 10.6
RPS3P23396 C15orf39-206ENST00000565074 3152 ntAPPRIS ALT213.36□□□□□ -0.274e-6■□□□□ 10.6
RPS3P23396 M6PR-204ENST00000539143 650 ntTSL 513.32□□□□□ -0.289e-10■□□□□ 10.6
RPS3P23396 PISD-210ENST00000442379 722 ntTSL 213.21□□□□□ -0.294e-6■□□□□ 10.6
RPS3P23396 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.314e-6■□□□□ 10.6
RPS3P23396 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.324e-6■□□□□ 10.6
RPS3P23396 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.99□□□□□ -0.334e-6■□□□□ 10.6
RPS3P23396 CERS5-202ENST00000380189 2998 ntTSL 1 (best)12.93□□□□□ -0.344e-6■□□□□ 10.6
RPS3P23396 PLOD3-210ENST00000463479 505 ntTSL 212.43□□□□□ -0.424e-6■□□□□ 10.6
RPS3P23396 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC12.22□□□□□ -0.454e-6■□□□□ 10.6
RPS3P23396 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.464e-6■□□□□ 10.6
RPS3P23396 PLOD3-211ENST00000466881 661 ntTSL 211.94□□□□□ -0.54e-6■□□□□ 10.6
RPS3P23396 PISD-208ENST00000437808 2264 ntTSL 511.9□□□□□ -0.54e-6■□□□□ 10.6
RPS3P23396 SCAP-208ENST00000448217 550 ntTSL 411.83□□□□□ -0.529e-10■□□□□ 10.6
RPS3P23396 CERS5-205ENST00000542320 951 ntTSL 211.65□□□□□ -0.544e-6■□□□□ 10.6
RPS3P23396 AIFM2-203ENST00000482166 952 ntTSL 311.35□□□□□ -0.594e-6■□□□□ 10.6
RPS3P23396 SREBF2-207ENST00000490262 450 ntTSL 211.34□□□□□ -0.594e-6■□□□□ 10.6
RPS3P23396 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.64e-6■□□□□ 10.6
RPS3P23396 SCAP-214ENST00000495603 706 ntTSL 211□□□□□ -0.659e-10■□□□□ 10.6
RPS3P23396 PISD-207ENST00000435900 1723 ntTSL 510.98□□□□□ -0.654e-6■□□□□ 10.6
RPS3P23396 PISD-204ENST00000422020 1015 ntTSL 510.73□□□□□ -0.694e-6■□□□□ 10.6
RPS3P23396 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.694e-6■□□□□ 10.6
RPS3P23396 M6PR-212ENST00000544193 255 ntTSL 39.77□□□□□ -0.859e-10■□□□□ 10.6
RPS3P23396 TMEM87A-203ENST00000448392 3049 ntTSL 1 (best) BASIC8.72□□□□□ -1.014e-6■□□□□ 10.6
RPS3P23396 TMEM87A-205ENST00000562946 1430 ntTSL 28.53□□□□□ -1.044e-6■□□□□ 10.6
RPS3P23396 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.094e-6■□□□□ 10.6
RPS3P23396 SORT1-206ENST00000485149 442 ntTSL 35.84□□□□□ -1.474e-6■□□□□ 10.6
RPS3P23396 TMEM87A-213ENST00000569075 1369 ntTSL 24.14□□□□□ -1.754e-6■□□□□ 10.6
RPS3P23396 CASD1-204ENST00000447923 532 ntTSL 42.65□□□□□ -1.994e-6■□□□□ 10.6
RPS3P23396 LRRC59-202ENST00000503118 438 ntTSL 57.56□□□□□ -1.28e-13■□□□□ 10.6
RPS3P23396 RDH11-208ENST00000556692 801 ntTSL 23.06□□□□□ -1.921e-6■□□□□ 10.6
RPS3P23396 RPL36A-204ENST00000465340 2240 ntTSL 213.01□□□□□ -0.334e-15■□□□□ 10.5
RPS3P23396 RPL36A-208ENST00000491851 547 ntTSL 25.08□□□□□ -1.64e-15■□□□□ 10.5
RPS3P23396 GMDS-201ENST00000380805 1743 ntTSL 219.12■□□□□ 0.653e-7■□□□□ 10.5
RPS3P23396 PRMT1-216ENST00000530361 866 ntTSL 317.5■□□□□ 0.393e-7■□□□□ 10.5
RPS3P23396 PABPC4-207ENST00000451091 898 ntTSL 322.92■■□□□ 1.263e-6■□□□□ 10.5
RPS3P23396 PABPC4-225ENST00000531243 532 ntTSL 420.98■□□□□ 0.953e-6■□□□□ 10.5
RPS3P23396 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.15■□□□□ 0.823e-6■□□□□ 10.5
RPS3P23396 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.08■□□□□ 0.163e-6■□□□□ 10.5
RPS3P23396 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-6■□□□□ 10.5
RPS3P23396 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.15■□□□□ 0.023e-6■□□□□ 10.5
RPS3P23396 KDM5B-208ENST00000491153 596 ntTSL 27.61□□□□□ -1.192e-6■□□□□ 10.5
RPS3P23396 MCM4-206ENST00000519138 927 ntTSL 212.05□□□□□ -0.483e-6■□□□□ 10.5
RPS3P23396 RPL36A-205ENST00000465744 710 ntTSL 1 (best)11.41□□□□□ -0.583e-15■□□□□ 10.5
RPS3P23396 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC10.82□□□□□ -0.683e-15■□□□□ 10.5
RPS3P23396 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.15□□□□□ -0.943e-15■□□□□ 10.5
RPS3P23396 RPL36A-203ENST00000427805 910 ntTSL 1 (best) BASIC9.07□□□□□ -0.963e-15■□□□□ 10.5
RPS3P23396 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.35□□□□□ -1.233e-15■□□□□ 10.5
RPS3P23396 RPL36A-201ENST00000372849 433 ntTSL 57.22□□□□□ -1.253e-15■□□□□ 10.5
RPS3P23396 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.83□□□□□ -1.483e-15■□□□□ 10.5
RPS3P23396 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.483e-15■□□□□ 10.5
RPS3P23396 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.73□□□□□ -2.133e-15■□□□□ 10.5
RPS3P23396 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.834e-6■□□□□ 10.5
RPS3P23396 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.354e-6■□□□□ 10.5
RPS3P23396 TMPO-207ENST00000548223 736 ntTSL 26.19□□□□□ -1.424e-6■□□□□ 10.5
RPS3P23396 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.54e-6■□□□□ 10.5
RPS3P23396 CBX5-203ENST00000547872 745 ntTSL 23.57□□□□□ -1.844e-6■□□□□ 10.5
RPS3P23396 CPPED1-204ENST00000539677 568 ntTSL 212.99□□□□□ -0.331e-7■□□□□ 10.5
RPS3P23396 ACTN1-215ENST00000555616 919 ntTSL 39.38□□□□□ -0.912e-6■□□□□ 10.5
RPS3P23396 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.94□□□□□ -0.022e-14■□□□□ 10.5
RPS3P23396 FABP1-204ENST00000495375 2084 ntTSL 314.39□□□□□ -0.112e-14■□□□□ 10.5
RPS3P23396 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.082e-14■□□□□ 10.5
RPS3P23396 LARP1-204ENST00000518297 2630 ntTSL 519.94■□□□□ 0.782e-6■□□□□ 10.5
RPS3P23396 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.151e-8■□□□□ 10.5
RPS3P23396 SCARNA9-201ENST00000530422 353 ntBASIC6.6□□□□□ -1.352e-17■□□□□ 10.5
RPS3P23396 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.562e-17■□□□□ 10.5
RPS3P23396 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.722e-17■□□□□ 10.5
RPS3P23396 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 42.26□□□□□ -2.052e-17■□□□□ 10.5
RPS3P23396 RPL36A-207ENST00000489407 373 ntTSL 20.13□□□□□ -2.392e-17■□□□□ 10.5
RPS3P23396 WARS-216ENST00000554601 719 ntTSL 25.92□□□□□ -1.467e-7■□□□□ 10.5
RPS3P23396 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.31□□□□□ -0.287e-17■□□□□ 10.5
RPS3P23396 RPL10-209ENST00000451365 713 ntTSL 1 (best)10.32□□□□□ -0.767e-17■□□□□ 10.5
RPS3P23396 EIF3G-213ENST00000593054 453 ntTSL 510.57□□□□□ -0.722e-8■□□□□ 10.5
RPS3P23396 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.09■□□□□ 0.172e-51■□□□□ 10.5
RPS3P23396 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.254e-21■□□□□ 10.5
RPS3P23396 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.784e-21■□□□□ 10.5
RPS3P23396 RNA5SP259-201ENST00000365541 109 ntBASIC0.39□□□□□ -2.354e-21■□□□□ 10.5
RPS3P23396 DECR1-214ENST00000521668 520 ntTSL 59.96□□□□□ -0.823e-6■□□□□ 10.5
RPS3P23396 DECR1-212ENST00000520859 567 ntTSL 45.34□□□□□ -1.553e-6■□□□□ 10.5
RPS3P23396 POLR2H-201ENST00000412877 836 ntTSL 221.39■■□□□ 1.012e-7■□□□□ 10.5
RPS3P23396 DUT-209ENST00000559852 340 ntTSL 25.01□□□□□ -1.618e-7■□□□□ 10.5
RPS3P23396 RPL10-208ENST00000449494 622 ntTSL 514.73□□□□□ -0.051e-16■□□□□ 10.5
RPS3P23396 RPL10-205ENST00000427682 457 ntTSL 59.99□□□□□ -0.811e-16■□□□□ 10.5
RPS3P23396 RPL10-206ENST00000428169 292 ntTSL 59.43□□□□□ -0.91e-16■□□□□ 10.5
RPS3P23396 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.055e-7■□□□□ 10.5
RPS3P23396 CPSF1-205ENST00000531042 580 ntTSL 515.15■□□□□ 0.025e-7■□□□□ 10.5
RPS3P23396 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.265e-7■□□□□ 10.5
RPS3P23396 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.95■■□□□ 1.424e-7■□□□□ 10.5
RPS3P23396 FCGRT-208ENST00000595881 2681 ntTSL 219.77■□□□□ 0.754e-7■□□□□ 10.5
RPS3P23396 FCGRT-214ENST00000598927 1616 ntTSL 517.94■□□□□ 0.464e-7■□□□□ 10.5
RPS3P23396 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.454e-7■□□□□ 10.5
RPS3P23396 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.454e-7■□□□□ 10.5
RPS3P23396 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.71■□□□□ 0.435e-7■□□□□ 10.5
RPS3P23396 COL9A3-214ENST00000490398 496 ntTSL 417.59■□□□□ 0.418e-23■□□□□ 10.5
RPS3P23396 COL9A3-212ENST00000481800 548 ntTSL 417.06■□□□□ 0.328e-23■□□□□ 10.5
RPS3P23396 COL9A3-209ENST00000469852 901 ntTSL 314.55□□□□□ -0.088e-23■□□□□ 10.5
RPS3P23396 FDPS-214ENST00000489324 475 ntTSL 29.64□□□□□ -0.875e-21■□□□□ 10.5
RPS3P23396 CPOX-203ENST00000512905 593 ntTSL 54.18□□□□□ -1.745e-21■□□□□ 10.5
RPS3P23396 GALE-212ENST00000470383 2073 ntTSL 225.91■■□□□ 1.745e-7■□□□□ 10.4
RPS3P23396 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.25e-7■□□□□ 10.4
Retrieved 100 of 24,271 protein–RNA pairs in 489.6 ms