Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC074138.1-201ENST00000611182 1303 ntBASIC18.74■□□□□ 0.59
KCNA3P22001 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 AC025271.4-201ENST00000621477 1726 ntBASIC18.74■□□□□ 0.59
KCNA3P22001 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 RPS9P1-201ENST00000419943 583 ntBASIC18.74■□□□□ 0.59
KCNA3P22001 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.74■□□□□ 0.59
KCNA3P22001 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.74■□□□□ 0.59
KCNA3P22001 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.74■□□□□ 0.59
KCNA3P22001 IGHV3-37-201ENST00000518544 340 ntBASIC18.74■□□□□ 0.59
KCNA3P22001 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 DUX4L46-201ENST00000566845 751 ntBASIC18.74■□□□□ 0.59
KCNA3P22001 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.74■□□□□ 0.59
KCNA3P22001 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNA3P22001 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNA3P22001 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
KCNA3P22001 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNA3P22001 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNA3P22001 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.74■□□□□ 0.59
KCNA3P22001 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KCNA3P22001 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
KCNA3P22001 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
KCNA3P22001 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNA3P22001 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNA3P22001 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 RN7SKP175-201ENST00000408472 289 ntBASIC18.73■□□□□ 0.59
KCNA3P22001 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 KLF2P1-201ENST00000447438 1042 ntBASIC18.73■□□□□ 0.59
KCNA3P22001 AP002803.1-201ENST00000528836 498 ntBASIC18.73■□□□□ 0.59
KCNA3P22001 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.73■□□□□ 0.59
KCNA3P22001 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.73■□□□□ 0.59
KCNA3P22001 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.73■□□□□ 0.59
KCNA3P22001 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
KCNA3P22001 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KCNA3P22001 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
KCNA3P22001 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 AC010141.1-201ENST00000411585 623 ntBASIC18.72■□□□□ 0.59
KCNA3P22001 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.72■□□□□ 0.59
KCNA3P22001 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 HLA-K-203ENST00000430151 1046 ntBASIC18.72■□□□□ 0.59
KCNA3P22001 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 PIN4P1-201ENST00000451079 396 ntBASIC18.72■□□□□ 0.59
KCNA3P22001 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.72■□□□□ 0.59
KCNA3P22001 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.72■□□□□ 0.59
KCNA3P22001 SAMD11P1-201ENST00000571429 661 ntBASIC18.72■□□□□ 0.59
KCNA3P22001 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.72■□□□□ 0.59
KCNA3P22001 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KCNA3P22001 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.72■□□□□ 0.59
KCNA3P22001 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.72■□□□□ 0.59
KCNA3P22001 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms