Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.78□□□□□ -0.04
NCK1P16333 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NCK1P16333 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.78□□□□□ -0.04
NCK1P16333 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
NCK1P16333 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.77□□□□□ -0.04
NCK1P16333 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NCK1P16333 AC097359.2-201ENST00000604992 2389 ntBASIC14.77□□□□□ -0.04
NCK1P16333 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NCK1P16333 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NCK1P16333 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.77□□□□□ -0.04
NCK1P16333 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.77□□□□□ -0.04
NCK1P16333 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
NCK1P16333 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
NCK1P16333 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NCK1P16333 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
NCK1P16333 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.77□□□□□ -0.05
NCK1P16333 AC105233.2-201ENST00000523697 349 ntBASIC14.77□□□□□ -0.05
NCK1P16333 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.77□□□□□ -0.05
NCK1P16333 AF228730.5-201ENST00000530288 346 ntBASIC14.77□□□□□ -0.05
NCK1P16333 HNRNPUP1-201ENST00000554987 333 ntBASIC14.77□□□□□ -0.05
NCK1P16333 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.77□□□□□ -0.05
NCK1P16333 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.77□□□□□ -0.05
NCK1P16333 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.77□□□□□ -0.05
NCK1P16333 AC097359.3-201ENST00000603982 1210 ntBASIC14.77□□□□□ -0.05
NCK1P16333 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NCK1P16333 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.77□□□□□ -0.05
NCK1P16333 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NCK1P16333 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.77□□□□□ -0.05
NCK1P16333 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.77□□□□□ -0.05
NCK1P16333 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NCK1P16333 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NCK1P16333 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NCK1P16333 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 IGHV3-22-201ENST00000520721 359 ntBASIC14.76□□□□□ -0.05
NCK1P16333 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 AC068137.2-201ENST00000605408 478 ntBASIC14.76□□□□□ -0.05
NCK1P16333 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.76□□□□□ -0.05
NCK1P16333 AL691432.3-201ENST00000621860 400 ntBASIC14.76□□□□□ -0.05
NCK1P16333 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NCK1P16333 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 MTHFR-210ENST00000641407 2387 ntBASIC14.76□□□□□ -0.05
NCK1P16333 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.76□□□□□ -0.05
NCK1P16333 AL607033.1-201ENST00000623900 1599 ntBASIC14.76□□□□□ -0.05
NCK1P16333 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
NCK1P16333 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NCK1P16333 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NCK1P16333 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms