Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 SPDYE14P-201ENST00000442619 822 ntBASIC16.1■□□□□ 0.17
BRAFP15056 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.1■□□□□ 0.17
BRAFP15056 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
BRAFP15056 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.1■□□□□ 0.17
BRAFP15056 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.1■□□□□ 0.17
BRAFP15056 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 OR2I1P-209ENST00000641730 5365 ntBASIC16.1■□□□□ 0.17
BRAFP15056 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 FGD5P1-202ENST00000614866 2498 ntBASIC16.1■□□□□ 0.17
BRAFP15056 GRK6P1-201ENST00000400595 1711 ntBASIC16.1■□□□□ 0.17
BRAFP15056 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
BRAFP15056 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BRAFP15056 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.1■□□□□ 0.17
BRAFP15056 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 CICP4-201ENST00000447359 2812 ntBASIC16.09■□□□□ 0.17
BRAFP15056 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BRAFP15056 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.09■□□□□ 0.17
BRAFP15056 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.09■□□□□ 0.17
BRAFP15056 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.09■□□□□ 0.17
BRAFP15056 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 AC026150.2-201ENST00000564693 1156 ntBASIC16.09■□□□□ 0.17
BRAFP15056 AP001059.3-201ENST00000619053 235 ntBASIC16.09■□□□□ 0.17
BRAFP15056 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BRAFP15056 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BRAFP15056 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.09■□□□□ 0.17
BRAFP15056 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BRAFP15056 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BRAFP15056 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.08■□□□□ 0.17
BRAFP15056 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
BRAFP15056 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.08■□□□□ 0.17
BRAFP15056 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BRAFP15056 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.08■□□□□ 0.17
BRAFP15056 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.08■□□□□ 0.17
BRAFP15056 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.08■□□□□ 0.17
BRAFP15056 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
BRAFP15056 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.08■□□□□ 0.16
BRAFP15056 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.08■□□□□ 0.16
BRAFP15056 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.08■□□□□ 0.16
BRAFP15056 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BRAFP15056 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.08■□□□□ 0.16
BRAFP15056 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 ALG1L8P-201ENST00000533887 760 ntBASIC16.08■□□□□ 0.16
BRAFP15056 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 AL512356.2-201ENST00000546955 174 ntBASIC16.08■□□□□ 0.16
BRAFP15056 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.08■□□□□ 0.16
BRAFP15056 AC025678.2-201ENST00000562061 970 ntBASIC16.08■□□□□ 0.16
BRAFP15056 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.08■□□□□ 0.16
BRAFP15056 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.08■□□□□ 0.16
BRAFP15056 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 Z92544.3-201ENST00000624747 417 ntBASIC16.08■□□□□ 0.16
BRAFP15056 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BRAFP15056 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
BRAFP15056 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms