Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 MIR663B-201ENST00000408361 115 ntBASIC17.35■□□□□ 0.37
RARBP10826 NUS1P3-201ENST00000423502 862 ntBASIC17.35■□□□□ 0.37
RARBP10826 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 POM121L10P-201ENST00000436994 1285 ntBASIC17.35■□□□□ 0.37
RARBP10826 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.35■□□□□ 0.37
RARBP10826 CNN2P10-201ENST00000443067 918 ntBASIC17.35■□□□□ 0.37
RARBP10826 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 HIST2H2BC-201ENST00000498492 580 ntBASIC17.35■□□□□ 0.37
RARBP10826 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.35■□□□□ 0.37
RARBP10826 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RARBP10826 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RARBP10826 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RARBP10826 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RARBP10826 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RARBP10826 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RARBP10826 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.34■□□□□ 0.37
RARBP10826 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.34■□□□□ 0.37
RARBP10826 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.34■□□□□ 0.37
RARBP10826 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.34■□□□□ 0.37
RARBP10826 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.34■□□□□ 0.37
RARBP10826 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.34■□□□□ 0.37
RARBP10826 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.34■□□□□ 0.37
RARBP10826 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RARBP10826 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.34■□□□□ 0.37
RARBP10826 AC015967.2-201ENST00000624092 234 ntBASIC17.34■□□□□ 0.37
RARBP10826 AC006435.4-201ENST00000625037 234 ntBASIC17.34■□□□□ 0.37
RARBP10826 AL356737.1-201ENST00000634391 234 ntBASIC17.34■□□□□ 0.37
RARBP10826 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RARBP10826 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RARBP10826 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.33■□□□□ 0.37
RARBP10826 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RARBP10826 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RARBP10826 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RARBP10826 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.33■□□□□ 0.36
RARBP10826 PCDHA1-201ENST00000378133 2726 ntBASIC17.33■□□□□ 0.36
RARBP10826 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RARBP10826 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms