Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.36□□□□□ -0.11
THBS1P07996 AL035633.1-201ENST00000406139 838 ntBASIC14.36□□□□□ -0.11
THBS1P07996 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 TOMM22P5-201ENST00000416399 439 ntBASIC14.36□□□□□ -0.11
THBS1P07996 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 AC125807.1-201ENST00000483097 614 ntBASIC14.36□□□□□ -0.11
THBS1P07996 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 AL512361.1-201ENST00000554200 418 ntBASIC14.36□□□□□ -0.11
THBS1P07996 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.36□□□□□ -0.11
THBS1P07996 AC010336.2-201ENST00000564226 506 ntBASIC14.36□□□□□ -0.11
THBS1P07996 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 AL390955.2-201ENST00000603032 514 ntBASIC14.36□□□□□ -0.11
THBS1P07996 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 AL138828.2-201ENST00000615812 383 ntBASIC14.36□□□□□ -0.11
THBS1P07996 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.36□□□□□ -0.11
THBS1P07996 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
THBS1P07996 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
THBS1P07996 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.36□□□□□ -0.11
THBS1P07996 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
THBS1P07996 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
THBS1P07996 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
THBS1P07996 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
THBS1P07996 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
THBS1P07996 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS1P07996 KLF2P3-201ENST00000451977 1087 ntBASIC14.35□□□□□ -0.11
THBS1P07996 KRT18P43-201ENST00000469825 1281 ntBASIC14.35□□□□□ -0.11
THBS1P07996 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 SDHAP3-202ENST00000515467 728 ntBASIC14.35□□□□□ -0.11
THBS1P07996 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 AC069120.2-201ENST00000524091 540 ntBASIC14.35□□□□□ -0.11
THBS1P07996 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS1P07996 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
THBS1P07996 AC051619.7-201ENST00000568314 623 ntBASIC14.35□□□□□ -0.11
THBS1P07996 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
THBS1P07996 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS1P07996 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.35□□□□□ -0.11
THBS1P07996 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.35□□□□□ -0.11
THBS1P07996 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.35□□□□□ -0.11
THBS1P07996 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
THBS1P07996 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.35□□□□□ -0.11
THBS1P07996 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms