Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TPM3P06753 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TPM3P06753 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TPM3P06753 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
TPM3P06753 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 AC010327.5-201ENST00000586923 3061 ntBASIC17.53■□□□□ 0.4
TPM3P06753 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 AC087386.2-201ENST00000623212 4637 ntBASIC17.53■□□□□ 0.4
TPM3P06753 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 AL359881.3-201ENST00000602640 1721 ntBASIC17.53■□□□□ 0.4
TPM3P06753 AL359183.1-201ENST00000623796 2132 ntBASIC17.53■□□□□ 0.4
TPM3P06753 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TPM3P06753 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.53■□□□□ 0.4
TPM3P06753 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 AC092910.1-201ENST00000482027 1129 ntBASIC17.53■□□□□ 0.4
TPM3P06753 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.53■□□□□ 0.4
TPM3P06753 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.53■□□□□ 0.4
TPM3P06753 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.53■□□□□ 0.4
TPM3P06753 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.53■□□□□ 0.4
TPM3P06753 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TPM3P06753 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.53■□□□□ 0.4
TPM3P06753 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.53■□□□□ 0.4
TPM3P06753 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TPM3P06753 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TPM3P06753 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.52■□□□□ 0.4
TPM3P06753 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.52■□□□□ 0.4
TPM3P06753 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TPM3P06753 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 AL691432.1-201ENST00000596308 1422 ntBASIC17.52■□□□□ 0.4
TPM3P06753 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TPM3P06753 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.52■□□□□ 0.4
TPM3P06753 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TPM3P06753 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM3P06753 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM3P06753 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.52■□□□□ 0.39
TPM3P06753 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TPM3P06753 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TPM3P06753 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TPM3P06753 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms