Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.45■□□□□ 0.54
COL1A1P02452 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL1A1P02452 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
COL1A1P02452 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL1A1P02452 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 AC007950.2-201ENST00000615045 2347 ntBASIC18.44■□□□□ 0.54
COL1A1P02452 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 CLUHP2-201ENST00000426660 1303 ntBASIC18.44■□□□□ 0.54
COL1A1P02452 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
COL1A1P02452 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.44■□□□□ 0.54
COL1A1P02452 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.44■□□□□ 0.54
COL1A1P02452 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.44■□□□□ 0.54
COL1A1P02452 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
COL1A1P02452 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.44■□□□□ 0.54
COL1A1P02452 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL1A1P02452 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.43■□□□□ 0.54
COL1A1P02452 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.43■□□□□ 0.54
COL1A1P02452 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
COL1A1P02452 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL1A1P02452 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL1A1P02452 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL1A1P02452 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.43■□□□□ 0.54
COL1A1P02452 AC026434.2-201ENST00000506094 1078 ntBASIC18.43■□□□□ 0.54
COL1A1P02452 AC105129.2-201ENST00000559536 390 ntBASIC18.43■□□□□ 0.54
COL1A1P02452 OR10B1P-201ENST00000601666 907 ntBASIC18.43■□□□□ 0.54
COL1A1P02452 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
COL1A1P02452 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL1A1P02452 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.43■□□□□ 0.54
COL1A1P02452 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.43■□□□□ 0.54
COL1A1P02452 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.43■□□□□ 0.54
COL1A1P02452 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
COL1A1P02452 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms