Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 AC018529.2-202ENST00000611482 3087 ntBASIC13.11□□□□□ -0.31
SIX6O95475 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SIX6O95475 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SIX6O95475 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SIX6O95475 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 AL359881.3-201ENST00000602640 1721 ntBASIC13.1□□□□□ -0.31
SIX6O95475 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 PPT1-213ENST00000641319 2388 ntBASIC13.1□□□□□ -0.31
SIX6O95475 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AC011474.4-201ENST00000623523 2076 ntBASIC13.1□□□□□ -0.31
SIX6O95475 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AL645939.2-201ENST00000427340 991 ntBASIC13.1□□□□□ -0.31
SIX6O95475 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.1□□□□□ -0.31
SIX6O95475 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.1□□□□□ -0.31
SIX6O95475 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.1□□□□□ -0.31
SIX6O95475 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.1□□□□□ -0.31
SIX6O95475 GGTLC5P-201ENST00000617623 998 ntBASIC13.1□□□□□ -0.31
SIX6O95475 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 MST1P2-201ENST00000457982 2291 ntBASIC13.1□□□□□ -0.31
SIX6O95475 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SIX6O95475 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SIX6O95475 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.1□□□□□ -0.31
SIX6O95475 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SIX6O95475 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 AC105206.1-202ENST00000314927 2368 ntBASIC13.09□□□□□ -0.31
SIX6O95475 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.09□□□□□ -0.31
SIX6O95475 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.09□□□□□ -0.31
SIX6O95475 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SIX6O95475 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SIX6O95475 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
SIX6O95475 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SIX6O95475 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms