Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
O00370 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
O00370 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
O00370 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.62■□□□□ 0.25
O00370 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.61■□□□□ 0.25
O00370 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.61■□□□□ 0.25
O00370 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
O00370 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 AL121723.1-201ENST00000445194 1519 ntBASIC16.61■□□□□ 0.25
O00370 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.61■□□□□ 0.25
O00370 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
O00370 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.61■□□□□ 0.25
O00370 KRT18P43-201ENST00000469825 1281 ntBASIC16.61■□□□□ 0.25
O00370 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.61■□□□□ 0.25
O00370 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
O00370 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.61■□□□□ 0.25
O00370 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
O00370 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
O00370 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.61■□□□□ 0.25
O00370 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
O00370 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
O00370 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.6■□□□□ 0.25
O00370 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 AL009178.2-201ENST00000597278 2719 ntBASIC16.6■□□□□ 0.25
O00370 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
O00370 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
O00370 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 SPDYE19P-201ENST00000338590 713 ntBASIC16.6■□□□□ 0.25
O00370 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
O00370 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
O00370 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 AL133267.1-201ENST00000398220 340 ntBASIC16.6■□□□□ 0.25
O00370 AC002472.2-201ENST00000442739 958 ntBASIC16.6■□□□□ 0.25
O00370 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.6■□□□□ 0.25
O00370 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
O00370 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.6■□□□□ 0.25
O00370 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.6■□□□□ 0.25
O00370 AC023310.3-201ENST00000557027 670 ntBASIC16.6■□□□□ 0.25
O00370 AC100756.1-201ENST00000562736 682 ntBASIC16.6■□□□□ 0.25
O00370 AC138749.3-201ENST00000567691 622 ntBASIC16.6■□□□□ 0.25
O00370 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.6■□□□□ 0.25
O00370 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.6■□□□□ 0.25
O00370 MIR4745-201ENST00000577608 62 ntBASIC16.6■□□□□ 0.25
O00370 AC116165.1-201ENST00000611806 668 ntBASIC16.6■□□□□ 0.25
O00370 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
O00370 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
O00370 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
O00370 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.6■□□□□ 0.25
O00370 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
O00370 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.6■□□□□ 0.25
O00370 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
O00370 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
O00370 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms