Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC009477.1-201ENST00000452936 217 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC004890.2-204ENST00000481968 304 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 SLED1-202ENST00000512051 380 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC044860.1-202ENST00000559481 777 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 AP003400.6-201ENST00000624698 740 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 AL161772.1-201ENST00000610494 4412 ntBASIC15.63■□□□□ 0.09
CFAP99D6REC4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 AL009178.2-201ENST00000597278 2719 ntBASIC15.62■□□□□ 0.09
CFAP99D6REC4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.62■□□□□ 0.09
CFAP99D6REC4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 AC011467.4-201ENST00000594891 528 ntBASIC15.62■□□□□ 0.09
CFAP99D6REC4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CFAP99D6REC4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.62■□□□□ 0.09
CFAP99D6REC4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CFAP99D6REC4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.61■□□□□ 0.09
CFAP99D6REC4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms