Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ARMC10P1-201ENST00000313754 855 ntBASIC11.91□□□□□ -0.5
COLCA2A8K830 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.91□□□□□ -0.5
COLCA2A8K830 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC11.91□□□□□ -0.5
COLCA2A8K830 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.91□□□□□ -0.5
COLCA2A8K830 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.91□□□□□ -0.5
COLCA2A8K830 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.91□□□□□ -0.5
COLCA2A8K830 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC11.91□□□□□ -0.5
COLCA2A8K830 AC091167.2-201ENST00000579581 588 ntBASIC11.91□□□□□ -0.5
COLCA2A8K830 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.91□□□□□ -0.5
COLCA2A8K830 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
COLCA2A8K830 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 AC125634.1-201ENST00000438758 1403 ntBASIC11.91□□□□□ -0.5
COLCA2A8K830 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 FAM90A11P-201ENST00000518378 2218 ntBASIC11.91□□□□□ -0.5
COLCA2A8K830 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.91□□□□□ -0.5
COLCA2A8K830 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
COLCA2A8K830 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
COLCA2A8K830 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.91□□□□□ -0.5
COLCA2A8K830 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.9□□□□□ -0.5
COLCA2A8K830 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
COLCA2A8K830 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
COLCA2A8K830 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.9□□□□□ -0.5
COLCA2A8K830 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 MMP23A-201ENST00000234610 1017 ntBASIC11.9□□□□□ -0.5
COLCA2A8K830 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 KRT17P3-201ENST00000420566 1262 ntBASIC11.9□□□□□ -0.5
COLCA2A8K830 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC11.9□□□□□ -0.5
COLCA2A8K830 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 TCAM1P-207ENST00000485295 1537 ntBASIC11.9□□□□□ -0.5
COLCA2A8K830 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
COLCA2A8K830 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.9□□□□□ -0.5
COLCA2A8K830 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
COLCA2A8K830 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COLCA2A8K830 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COLCA2A8K830 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
COLCA2A8K830 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
COLCA2A8K830 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.89□□□□□ -0.51
COLCA2A8K830 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms