Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC108725.1-201ENST00000495472 409 ntBASIC13.56□□□□□ -0.24
MBD3L3A6NE82 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 FAM86HP-204ENST00000513466 959 ntBASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC022616.1-201ENST00000518688 554 ntBASIC13.56□□□□□ -0.24
MBD3L3A6NE82 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 TNRC18P3-201ENST00000441896 2691 ntBASIC13.56□□□□□ -0.24
MBD3L3A6NE82 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.56□□□□□ -0.24
MBD3L3A6NE82 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AL354989.2-201ENST00000435838 1540 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 EIF3FP3-201ENST00000434851 1086 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AC245100.3-201ENST00000441281 285 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 Z93015.1-201ENST00000451718 390 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 AC009090.5-201ENST00000624886 2285 ntBASIC13.55□□□□□ -0.24
MBD3L3A6NE82 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.55□□□□□ -0.24
MBD3L3A6NE82 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.54□□□□□ -0.24
MBD3L3A6NE82 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms