Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC66A2RUB6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17■□□□□ 0.31
CCDC66A2RUB6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC66A2RUB6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AL139385.1-201ENST00000611744 3272 ntBASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AC020658.6-201ENST00000623564 1870 ntBASIC16.99■□□□□ 0.31
CCDC66A2RUB6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AC027612.1-201ENST00000445234 2395 ntBASIC16.99■□□□□ 0.31
CCDC66A2RUB6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 MIR4321-201ENST00000592276 80 ntBASIC16.99■□□□□ 0.31
CCDC66A2RUB6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC66A2RUB6 AC027601.5-201ENST00000624065 2482 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AP003680.1-201ENST00000598970 3660 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 RNA5SP419-201ENST00000515908 135 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AL662844.1-201ENST00000546340 181 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AC002347.1-201ENST00000569543 541 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AP001005.1-201ENST00000571755 1248 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 SLC25A6P4-201ENST00000586535 553 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AP001282.1-201ENST00000531301 1499 ntBASIC16.98■□□□□ 0.31
CCDC66A2RUB6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC66A2RUB6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC66A2RUB6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms