Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AL139400.1-201ENST00000366220 510 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 FO393414.2-201ENST00000405153 598 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AC067863.1-201ENST00000494933 530 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AC015911.4-201ENST00000588022 1070 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 Z92544.3-201ENST00000624747 417 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 AP003680.1-201ENST00000598970 3660 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.81□□□□□ -0.52
HLA-DRB4X5D2U9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 KRT8P12-202ENST00000472924 1397 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SNX18-202ENST00000343017 3140 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SERBP1P3-201ENST00000459980 809 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AC125807.1-201ENST00000483097 614 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AL079307.3-201ENST00000556114 283 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 AL589739.1-201ENST00000607720 493 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms