Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.79■□□□□ 0.44
CLIC4Q9Y696 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 AP000845.1-201ENST00000581677 2131 ntBASIC17.78■□□□□ 0.44
CLIC4Q9Y696 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 MIR1233-2-201ENST00000408138 82 ntBASIC17.78■□□□□ 0.44
CLIC4Q9Y696 MIR1233-1-201ENST00000408722 82 ntBASIC17.78■□□□□ 0.44
CLIC4Q9Y696 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
CLIC4Q9Y696 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC015922.1-201ENST00000421102 1152 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC092580.3-201ENST00000430932 139 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CNN2P2-201ENST00000443536 909 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CNN2P3-201ENST00000450201 906 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC125807.1-201ENST00000483097 614 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC004449.1-201ENST00000564240 433 ntBASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.77■□□□□ 0.44
CLIC4Q9Y696 AL136317.3-201ENST00000618497 906 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms