Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC063926.3-201ENST00000624734 5658 ntBASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ELK1P1-201ENST00000485699 580 ntBASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 MIR4259-201ENST00000584466 101 ntBASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AL512343.1-201ENST00000605837 169 ntBASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 AC073347.1-201ENST00000421633 2643 ntBASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHB1Q9Y5F3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHB1Q9Y5F3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 PKD1P5-201ENST00000532415 10291 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 SLED1-202ENST00000512051 380 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 AC123567.1-201ENST00000548294 1261 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 AL109936.8-201ENST00000641772 604 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 FLJ16779-201ENST00000612722 7638 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 NORAD-201ENST00000565493 5339 ntBASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHB1Q9Y5F3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHB1Q9Y5F3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms